PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Araip.86J2T
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis
Family bHLH
Protein Properties Length: 198aa    MW: 21802.1 Da    PI: 9.2213
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Araip.86J2TgenomeNCGR_PGCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH30.19e-104589554
                 HHHHHHHHHHHHHHHHHHHHCTSCC.C...TTS-STCHHHHHHHHHHHHHH CS
          HLH  5 hnerErrRRdriNsafeeLrellPk.askapskKlsKaeiLekAveYIksL 54
                 h+++Er RR+ri +++  L+el+P+ +      K + a++L + v+Y+k L
  Araip.86J2T 45 HSIAERLRRERIAERMKALQELVPSiN------KTDRAAMLDEIVDYVKFL 89
                 99***********************77......****************98 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
CDDcd000835.59E-103894No hitNo description
SuperFamilySSF474591.44E-153899IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PROSITE profilePS5088816.1264089IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.105.3E-1542100IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000102.8E-74589IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003535.9E-114695IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 198 aa     Download sequence    Send to blast
MRKLALQAFQ RQQAPNPVSV TALPQQPPGI RPRVRARRGQ ATDPHSIAER LRRERIAERM  60
KALQELVPSI NKTDRAAMLD EIVDYVKFLR LQVKVLSMSR LGGAGAVAQL VADVPLSAVE  120
QGEEIEGGGN NEQAWEKWSN DGIEQQVAKL MEEDVGAAMQ FLQSKALCIM PISLASAIFR  180
MPPSDPSSLI KPESNSHS
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
14954RLRRER
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_016176129.11e-136PREDICTED: transcription factor UNE12-like isoform X1
SwissprotO227688e-84UNE12_ARATH; Transcription factor UNE12
TrEMBLA0A0L9VJK91e-111A0A0L9VJK9_PHAAN; Uncharacterized protein
TrEMBLA0A0S3SQ901e-111A0A0S3SQ90_PHAAN; Uncharacterized protein
STRINGGLYMA20G36770.11e-107(Glycine max)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF112053239
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G02590.32e-68bHLH family protein